Heterogeneotasunaren analisi azkar eta automatizatua krio-mikroskopia elektronikoan

Authors

  • Oier Lauzirika Zarrabeitia Centro Nacional de Biotecnología
  • José Luis Vilas Prieto Centro Nacional de Biotecnología
  • Mikel Iceta Tena Centro Nacional de Biotecnología
  • José María Carazo García Centro Nacional de Biotecnología
  • Carlos Oscar Sorzano Sánchez Centro Nacional de Biotecnología

DOI:

https://doi.org/10.26876/ikergazte.vi.03.13

Keywords:

Cryo-Electron Microscopy, Image processing, Single Particle Analysis, Clustering, Orthonal group synchronization

Abstract

Understanding structural heterogeneity is a key challenge in Cryo-Electron Microscopy (Cryo-EM). We propose a novel method that leverages the natural similarity between neighboring projection directions to perform a localized Principal Component Analysis (PCA) in directional subsets of the data. These local analyses are then globally synchronized using Orthogonal Group Synchronization, a novel field in applied mathematics. Our approach is designed to pose very few execution parametes, reducing the need for extensive user tuning. The parameters involved have clear physical and statistical interpretations, enhancing their usability and transparency. In addition, it is also computationally efficient, achieving significantly faster execution times compared to conventional heterogeneity analysis methods. We validate our approach on both simulated and experimental datasets exhibiting compositional and conformational heterogeneity, demonstrating its effectiveness in capturing structural variability.

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Published

2025-05-30

How to Cite

Lauzirika Zarrabeitia, O., Vilas Prieto, J. L., Iceta Tena, M., Carazo García, J. M., & Sorzano Sánchez, C. O. (2025). Heterogeneotasunaren analisi azkar eta automatizatua krio-mikroskopia elektronikoan. IkerGazte. Nazioarteko Ikerketa Euskaraz, 3, 109–116. https://doi.org/10.26876/ikergazte.vi.03.13